A0A4P9ZUX7 protein (Dimargaris cristalligena)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4P9ZUX7

Beta-lactamase-like protein. (821 aa)

Predicted Functional Partners:

A0A4Q0A160

0.948

A0A4P9ZM19

0.730

A0A4P9ZQV5

0.703

A0A4P9ZR00

0.703

A0A4Q0A1T6

0.703

A0A4P9ZSD9

0.684

A0A4P9ZSD2

0.639

BJ085DRAFT_382

0.595

A0A4Q0A320

0.587

A0A4P9ZU96

0.584

Your Current Organism:

Dimargaris cristalligena

NCBI taxonomy Id: 215637
Other names: D. cristalligena

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4P9ZM19	A0A4P9ZUX7	A0A4P9ZM19	A0A4P9ZUX7	P-loop containing nucleoside triphosphate hydrolase protein.	Beta-lactamase-like protein.	0.730
A0A4P9ZQV5	A0A4P9ZR00	A0A4P9ZQV5	A0A4P9ZR00	Exosome complex exonuclease RRP41.	Ribosomal protein S5 domain 2-type protein.	0.999
A0A4P9ZQV5	A0A4P9ZSD9	A0A4P9ZQV5	A0A4P9ZSD9	Exosome complex exonuclease RRP41.	WD40-repeat-containing domain protein.	0.904
A0A4P9ZQV5	A0A4P9ZUX7	A0A4P9ZQV5	A0A4P9ZUX7	Exosome complex exonuclease RRP41.	Beta-lactamase-like protein.	0.703
A0A4P9ZQV5	A0A4Q0A1T6	A0A4P9ZQV5	A0A4Q0A1T6	Exosome complex exonuclease RRP41.	Ribosomal protein S5 domain 2-type protein.	0.999
A0A4P9ZR00	A0A4P9ZQV5	A0A4P9ZR00	A0A4P9ZQV5	Ribosomal protein S5 domain 2-type protein.	Exosome complex exonuclease RRP41.	0.999
A0A4P9ZR00	A0A4P9ZSD9	A0A4P9ZR00	A0A4P9ZSD9	Ribosomal protein S5 domain 2-type protein.	WD40-repeat-containing domain protein.	0.859
A0A4P9ZR00	A0A4P9ZUX7	A0A4P9ZR00	A0A4P9ZUX7	Ribosomal protein S5 domain 2-type protein.	Beta-lactamase-like protein.	0.703
A0A4P9ZR00	A0A4Q0A1T6	A0A4P9ZR00	A0A4Q0A1T6	Ribosomal protein S5 domain 2-type protein.	Ribosomal protein S5 domain 2-type protein.	0.999
A0A4P9ZSD2	A0A4P9ZUX7	A0A4P9ZSD2	A0A4P9ZUX7	Galactose mutarotase-like domain-containing protein.	Beta-lactamase-like protein.	0.639
A0A4P9ZSD2	A0A4Q0A160	A0A4P9ZSD2	A0A4Q0A160	Galactose mutarotase-like domain-containing protein.	Endonuclease.	0.666
A0A4P9ZSD9	A0A4P9ZQV5	A0A4P9ZSD9	A0A4P9ZQV5	WD40-repeat-containing domain protein.	Exosome complex exonuclease RRP41.	0.904
A0A4P9ZSD9	A0A4P9ZR00	A0A4P9ZSD9	A0A4P9ZR00	WD40-repeat-containing domain protein.	Ribosomal protein S5 domain 2-type protein.	0.859
A0A4P9ZSD9	A0A4P9ZUX7	A0A4P9ZSD9	A0A4P9ZUX7	WD40-repeat-containing domain protein.	Beta-lactamase-like protein.	0.684
A0A4P9ZSD9	A0A4Q0A1T6	A0A4P9ZSD9	A0A4Q0A1T6	WD40-repeat-containing domain protein.	Ribosomal protein S5 domain 2-type protein.	0.904
A0A4P9ZSD9	A0A4Q0A320	A0A4P9ZSD9	A0A4Q0A320	WD40-repeat-containing domain protein.	tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.	0.923
A0A4P9ZU96	A0A4P9ZUX7	A0A4P9ZU96	A0A4P9ZUX7	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	Beta-lactamase-like protein.	0.584
A0A4P9ZUX7	A0A4P9ZM19	A0A4P9ZUX7	A0A4P9ZM19	Beta-lactamase-like protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.730
A0A4P9ZUX7	A0A4P9ZQV5	A0A4P9ZUX7	A0A4P9ZQV5	Beta-lactamase-like protein.	Exosome complex exonuclease RRP41.	0.703
A0A4P9ZUX7	A0A4P9ZR00	A0A4P9ZUX7	A0A4P9ZR00	Beta-lactamase-like protein.	Ribosomal protein S5 domain 2-type protein.	0.703