STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9ZWB4Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (470 aa)    
Predicted Functional Partners:
A0A4P9ZXT8
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
 
 0.983
A0A4P9ZNL9
Dihydrofolate reductase-like domain-containing protein; Belongs to the dihydrofolate reductase family.
  
 
 0.926
A0A4P9ZZE1
Isomerase-domain-containing protein.
  
 
 0.910
A0A4P9ZQB6
Tryptophan synthase.
 
 
 
 0.896
A0A4P9ZRF5
Uncharacterized protein.
  
 0.894
A0A4P9ZWY9
Formate--tetrahydrofolate ligase-domain-containing protein.
  
 0.887
A0A4P9ZTX1
Phosphoribosylglycinamide formyltransferase.
  
 0.863
A0A4V1J3U0
Cytidine deaminase-like protein.
  
 0.862
A0A4P9ZNC7
Glycine cleavage system P-protein-domain-containing protein.
 
 
 0.858
A0A4P9ZYD1
Aminoimidazole ribonucleotide synthetase.
  
 0.856
Your Current Organism:
Dimargaris cristalligena
NCBI taxonomy Id: 215637
Other names: D. cristalligena
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