Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A4P9ZQ75 | A0A4P9ZRD9 | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | Isopentenyl-diphosphate delta-isomerase. | 0.518 |
A0A4P9ZQ75 | A0A4P9ZUQ0 | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | Alkyl transferase; Belongs to the UPP synthase family. | 0.863 |
A0A4P9ZQ75 | A0A4P9ZW37 | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | Farnesyl-diphosphate farnesyltransferase. | 0.783 |
A0A4P9ZQ75 | A0A4P9ZY55 | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.884 |
A0A4P9ZQ75 | A0A4P9ZZX0 | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | Isoprenoid synthase domain-containing protein; Belongs to the FPP/GGPP synthase family. | 0.871 |
A0A4P9ZQ75 | A0A4Q0A381 | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | Uncharacterized protein. | 0.999 |
A0A4P9ZQ75 | A0A4V1J4Z9 | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.872 |
A0A4P9ZQB6 | A0A4P9ZUQ0 | Tryptophan synthase. | Alkyl transferase; Belongs to the UPP synthase family. | 0.671 |
A0A4P9ZQB6 | A0A4P9ZW37 | Tryptophan synthase. | Farnesyl-diphosphate farnesyltransferase. | 0.577 |
A0A4P9ZQB6 | A0A4P9ZY55 | Tryptophan synthase. | Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.909 |
A0A4P9ZQB6 | A0A4P9ZZX0 | Tryptophan synthase. | Isoprenoid synthase domain-containing protein; Belongs to the FPP/GGPP synthase family. | 0.909 |
A0A4P9ZQB6 | A0A4V1J4Z9 | Tryptophan synthase. | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.909 |
A0A4P9ZRD9 | A0A4P9ZQ75 | Isopentenyl-diphosphate delta-isomerase. | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | 0.518 |
A0A4P9ZRD9 | A0A4P9ZUQ0 | Isopentenyl-diphosphate delta-isomerase. | Alkyl transferase; Belongs to the UPP synthase family. | 0.817 |
A0A4P9ZRD9 | A0A4P9ZW37 | Isopentenyl-diphosphate delta-isomerase. | Farnesyl-diphosphate farnesyltransferase. | 0.899 |
A0A4P9ZRD9 | A0A4P9ZY55 | Isopentenyl-diphosphate delta-isomerase. | Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.912 |
A0A4P9ZRD9 | A0A4P9ZYY1 | Isopentenyl-diphosphate delta-isomerase. | Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. | 0.940 |
A0A4P9ZRD9 | A0A4P9ZZX0 | Isopentenyl-diphosphate delta-isomerase. | Isoprenoid synthase domain-containing protein; Belongs to the FPP/GGPP synthase family. | 0.885 |
A0A4P9ZRD9 | A0A4V1J4Z9 | Isopentenyl-diphosphate delta-isomerase. | Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.898 |
A0A4P9ZRD9 | A0A4V1J599 | Isopentenyl-diphosphate delta-isomerase. | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | 0.924 |
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