STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9ZZ13DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)    
Predicted Functional Partners:
A0A4P9ZK04
RNA polymerase Rpb7.
   
 0.999
A0A4P9ZMA2
RNA polymerase Rpb5, C-terminal domain-containing protein.
   
 0.999
A0A4P9ZQZ1
DNA-directed RNA polymerase.
   
 0.999
A0A4P9ZR34
DNA-directed RNA polymerase.
   
 0.999
A0A4P9ZTD5
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.999
A0A4P9ZW57
DNA-directed RNA polymerase II subunit RPB4.
   
 0.999
A0A4Q0A0V2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.999
A0A4Q0A2F9
RNA polymerase N/8 kDa subunit.
   
 0.999
A0A4V1J5J5
DNA directed RNA polymerase.
   
 0.999
A0A4V1J5I2
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.996
Your Current Organism:
Dimargaris cristalligena
NCBI taxonomy Id: 215637
Other names: D. cristalligena
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