A0A4P9ZZX2 protein (Dimargaris cristalligena)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4P9ZZX2

Cyclin domain-containing protein. (90 aa)

Predicted Functional Partners:

A0A4P9ZZ63

0.941

A0A4P9ZXY4

0.841

A0A4P9ZNQ7

0.750

A0A4Q0A1J6

0.748

A0A4P9ZK96

0.671

A0A4P9ZLC0

0.671

A0A4P9ZM45

0.671

A0A4P9ZMY4

0.640

A0A4P9ZTU3

0.640

A0A4P9ZNJ4

0.563

Your Current Organism:

Dimargaris cristalligena

NCBI taxonomy Id: 215637
Other names: D. cristalligena

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4P9ZK96	A0A4P9ZNJ4	PI3K/PI4K domain-containing protein.	Beta-lactamase-like protein.	0.822
A0A4P9ZK96	A0A4P9ZNQ7	PI3K/PI4K domain-containing protein.	SPOC like C-terminal domain-containing protein.	0.880
A0A4P9ZK96	A0A4P9ZXY4	PI3K/PI4K domain-containing protein.	SPOC like C-terminal domain-containing protein.	0.882
A0A4P9ZK96	A0A4P9ZZ63	PI3K/PI4K domain-containing protein.	Glycerophosphodiester phosphodiesterase domain-containing protein.	0.478
A0A4P9ZK96	A0A4P9ZZX2	PI3K/PI4K domain-containing protein.	Cyclin domain-containing protein.	0.671
A0A4P9ZK96	A0A4Q0A1J6	PI3K/PI4K domain-containing protein.	DNA ligase.	0.800
A0A4P9ZLC0	A0A4P9ZNJ4	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	Beta-lactamase-like protein.	0.822
A0A4P9ZLC0	A0A4P9ZNQ7	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	SPOC like C-terminal domain-containing protein.	0.880
A0A4P9ZLC0	A0A4P9ZXY4	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	SPOC like C-terminal domain-containing protein.	0.882
A0A4P9ZLC0	A0A4P9ZZ63	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	Glycerophosphodiester phosphodiesterase domain-containing protein.	0.478
A0A4P9ZLC0	A0A4P9ZZX2	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	Cyclin domain-containing protein.	0.671
A0A4P9ZLC0	A0A4Q0A1J6	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	DNA ligase.	0.800
A0A4P9ZM45	A0A4P9ZNJ4	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	Beta-lactamase-like protein.	0.822
A0A4P9ZM45	A0A4P9ZNQ7	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	SPOC like C-terminal domain-containing protein.	0.880
A0A4P9ZM45	A0A4P9ZXY4	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	SPOC like C-terminal domain-containing protein.	0.882
A0A4P9ZM45	A0A4P9ZZ63	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	Glycerophosphodiester phosphodiesterase domain-containing protein.	0.478
A0A4P9ZM45	A0A4P9ZZX2	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	Cyclin domain-containing protein.	0.671
A0A4P9ZM45	A0A4Q0A1J6	Kinase-like domain-containing protein; Belongs to the PI3/PI4-kinase family.	DNA ligase.	0.800
A0A4P9ZMY4	A0A4P9ZNQ7	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	SPOC like C-terminal domain-containing protein.	0.557
A0A4P9ZMY4	A0A4P9ZZ63	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	Glycerophosphodiester phosphodiesterase domain-containing protein.	0.990