A0A4Q0A0L8 protein (Dimargaris cristalligena)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4Q0A0L8

Uncharacterized protein. (1378 aa)

Predicted Functional Partners:

A0A4P9ZRY6

0.957

A0A4P9ZVA7

0.949

A0A4P9ZYF8

0.935

A0A4Q0A0L7

0.920

A0A4P9ZTB2

0.915

A0A4P9ZZ29

0.914

A0A4P9ZVY8

0.909

A0A4P9ZSE3

0.877

A0A4V1J5J7

0.877

A0A4P9ZK47

0.869

Your Current Organism:

Dimargaris cristalligena

NCBI taxonomy Id: 215637
Other names: D. cristalligena

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4P9ZK47	A0A4P9ZRY6	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.741
A0A4P9ZK47	A0A4P9ZVA7	P-loop containing nucleoside triphosphate hydrolase protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.849
A0A4P9ZK47	A0A4P9ZVY8	P-loop containing nucleoside triphosphate hydrolase protein.	AAA_23 domain-containing protein.	0.715
A0A4P9ZK47	A0A4P9ZYF8	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.998
A0A4P9ZK47	A0A4P9ZZ29	P-loop containing nucleoside triphosphate hydrolase protein.	Meiotic recombination protein; Belongs to the MRE11/RAD32 family.	0.845
A0A4P9ZK47	A0A4Q0A0L8	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.869
A0A4P9ZRY6	A0A4P9ZK47	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.741
A0A4P9ZRY6	A0A4P9ZVY8	Uncharacterized protein.	AAA_23 domain-containing protein.	0.770
A0A4P9ZRY6	A0A4P9ZYF8	Uncharacterized protein.	Uncharacterized protein.	0.891
A0A4P9ZRY6	A0A4P9ZZ29	Uncharacterized protein.	Meiotic recombination protein; Belongs to the MRE11/RAD32 family.	0.755
A0A4P9ZRY6	A0A4Q0A0L8	Uncharacterized protein.	Uncharacterized protein.	0.957
A0A4P9ZSE3	A0A4Q0A0L7	Concanavalin A-like lectin/glucanase domain-containing protein.	WD40-repeat-containing domain protein.	0.979
A0A4P9ZSE3	A0A4Q0A0L8	Concanavalin A-like lectin/glucanase domain-containing protein.	Uncharacterized protein.	0.877
A0A4P9ZTB2	A0A4P9ZVY8	SMAD/FHA domain-containing protein.	AAA_23 domain-containing protein.	0.718
A0A4P9ZTB2	A0A4P9ZZ29	SMAD/FHA domain-containing protein.	Meiotic recombination protein; Belongs to the MRE11/RAD32 family.	0.805
A0A4P9ZTB2	A0A4Q0A0L8	SMAD/FHA domain-containing protein.	Uncharacterized protein.	0.915
A0A4P9ZVA7	A0A4P9ZK47	P-loop containing nucleoside triphosphate hydrolase protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.849
A0A4P9ZVA7	A0A4P9ZVY8	P-loop containing nucleoside triphosphate hydrolase protein.	AAA_23 domain-containing protein.	0.417
A0A4P9ZVA7	A0A4P9ZYF8	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.843
A0A4P9ZVA7	A0A4P9ZZ29	P-loop containing nucleoside triphosphate hydrolase protein.	Meiotic recombination protein; Belongs to the MRE11/RAD32 family.	0.588