STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Q0A0M7Pre-mRNA-splicing factor 38. (198 aa)    
Predicted Functional Partners:
A0A4P9ZPQ0
Splicing factor, Prp19-binding domain-containing protein.
   
 0.996
A0A4P9ZU64
FF domain-containing protein.
   
 0.992
A0A4P9ZUZ8
Matrin-type domain-containing protein.
   
 0.984
A0A4Q0A102
WD40-repeat-containing domain protein.
 
 
  0.975
A0A4Q0A3A2
Ubiquitin-related domain-containing protein.
    
 0.962
A0A4P9ZWB5
RED-like protein N-terminal region-domain-containing protein.
   
 0.919
A0A4P9ZS11
WD40 repeat-containing protein SMU1.
   
 0.915
A0A4P9ZPC3
PWI domain-containing protein.
   
 0.909
A0A4P9ZP46
TPR_REGION domain-containing protein.
   
 0.907
A0A4P9ZS95
Matrin-type domain-containing protein.
   
 0.905
Your Current Organism:
Dimargaris cristalligena
NCBI taxonomy Id: 215637
Other names: D. cristalligena
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.