STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V1J544Cleft lip and palate transmembrane protein 1-domain-containing protein. (329 aa)    
Predicted Functional Partners:
A0A4V1J3V0
Uncharacterized protein.
   
 
 0.874
A0A4P9ZU96
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
 
      0.792
A0A4Q0A1M2
Malic enzyme.
     
 0.728
A0A4V1J594
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.723
A0A4P9ZV37
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
     
 0.686
A0A4P9ZTE7
Pyridoxal phosphate-dependent transferase.
     
 0.674
A0A4V1J4S5
Lactate dehydrogenase B; Belongs to the LDH/MDH superfamily.
     
 0.668
A0A4P9ZSA5
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.665
A0A4P9ZW58
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
     
 0.663
A0A4P9ZVB5
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.662
Your Current Organism:
Dimargaris cristalligena
NCBI taxonomy Id: 215637
Other names: D. cristalligena
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