Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| A0A4P9ZK04 | A0A4P9ZMA2 | RNA polymerase Rpb7. | RNA polymerase Rpb5, C-terminal domain-containing protein. | 0.999 |
| A0A4P9ZK04 | A0A4P9ZQZ1 | RNA polymerase Rpb7. | DNA-directed RNA polymerase. | 0.999 |
| A0A4P9ZK04 | A0A4P9ZRC9 | RNA polymerase Rpb7. | Transcription initiation factor IIF, beta subunit. | 0.993 |
| A0A4P9ZK04 | A0A4P9ZV60 | RNA polymerase Rpb7. | Brf1-Tbp-Dna ternary complex. | 0.984 |
| A0A4P9ZK04 | A0A4P9ZW57 | RNA polymerase Rpb7. | DNA-directed RNA polymerase II subunit RPB4. | 0.999 |
| A0A4P9ZK04 | A0A4P9ZW78 | RNA polymerase Rpb7. | TFIIE beta domain-containing protein. | 0.974 |
| A0A4P9ZK04 | A0A4P9ZXL3 | RNA polymerase Rpb7. | HTH TFE/IIEalpha-type domain-containing protein. | 0.989 |
| A0A4P9ZK04 | A0A4P9ZZ13 | RNA polymerase Rpb7. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
| A0A4P9ZK04 | A0A4Q0A0V2 | RNA polymerase Rpb7. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| A0A4P9ZK04 | A0A4V1J5I2 | RNA polymerase Rpb7. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.993 |
| A0A4P9ZMA2 | A0A4P9ZK04 | RNA polymerase Rpb5, C-terminal domain-containing protein. | RNA polymerase Rpb7. | 0.999 |
| A0A4P9ZMA2 | A0A4P9ZQZ1 | RNA polymerase Rpb5, C-terminal domain-containing protein. | DNA-directed RNA polymerase. | 0.999 |
| A0A4P9ZMA2 | A0A4P9ZRC9 | RNA polymerase Rpb5, C-terminal domain-containing protein. | Transcription initiation factor IIF, beta subunit. | 0.996 |
| A0A4P9ZMA2 | A0A4P9ZV60 | RNA polymerase Rpb5, C-terminal domain-containing protein. | Brf1-Tbp-Dna ternary complex. | 0.988 |
| A0A4P9ZMA2 | A0A4P9ZW57 | RNA polymerase Rpb5, C-terminal domain-containing protein. | DNA-directed RNA polymerase II subunit RPB4. | 0.999 |
| A0A4P9ZMA2 | A0A4P9ZW78 | RNA polymerase Rpb5, C-terminal domain-containing protein. | TFIIE beta domain-containing protein. | 0.978 |
| A0A4P9ZMA2 | A0A4P9ZXL3 | RNA polymerase Rpb5, C-terminal domain-containing protein. | HTH TFE/IIEalpha-type domain-containing protein. | 0.989 |
| A0A4P9ZMA2 | A0A4P9ZZ13 | RNA polymerase Rpb5, C-terminal domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
| A0A4P9ZMA2 | A0A4Q0A0V2 | RNA polymerase Rpb5, C-terminal domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| A0A4P9ZMA2 | A0A4V1J5I2 | RNA polymerase Rpb5, C-terminal domain-containing protein. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.990 |
page 1 of 6