STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V1J5W4Uncharacterized protein. (152 aa)    
Predicted Functional Partners:
A0A4Q0A1I1
30S ribosomal protein S6.
  
  
 0.889
A0A4P9ZRE9
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
  
 
 0.765
A0A4Q0A2C9
40S ribosomal protein S20.
   
 
 0.696
A0A4Q0A1Z4
Ribosomal protein S10 domain-containing protein.
   
 
 0.690
A0A4P9ZZ03
Tyrosine--tRNA ligase.
  
  
 0.677
A0A4P9ZRR4
Ribosomal protein S2, flavodoxin-like domain-containing protein.
   
   0.664
A0A4P9ZRS0
Nucleic acid-binding protein; Belongs to the eIF-1A family.
   
  
 0.642
A0A4Q0A369
50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.641
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.626
A0A4P9ZRE2
Ribosomal protein S7 domain-containing protein.
  
   0.622
Your Current Organism:
Dimargaris cristalligena
NCBI taxonomy Id: 215637
Other names: D. cristalligena
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