STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rtn-2Hypothetical protein. (535 aa)    
Predicted Functional Partners:
ADP13050.1
ABC transporter, permease protein.
       0.831
yneF
Conserved uncharacterized protein YneF.
  
 0.793
yhdA
Regulatory protein CsrD.
 
  
 0.775
hmsT
HmsT (Hemin storage system protein).
  
 0.771
arcB
Aerobic respiration control sensor protein ArcB.
 
 
 0.768
barA
Hybrid sensory histidine kinase BarA.
 
  
 0.757
ADP13280.1
Putative signal transduction protein.
  
 0.743
ADP13048.1
Putative ABC transporter periplasmic binding protein.
       0.680
ADP13051.1
Putative ABC-transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.673
ADP10430.1
Sensory box protein.
 
 
0.659
Your Current Organism:
Erwinia sp. Ejp617
NCBI taxonomy Id: 215689
Other names: E. sp. Ejp617
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.