Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KGL13657.1 | cysE | LS73_00855 | LS73_00860 | Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
| KGL13657.1 | fliY_1 | LS73_00855 | LS73_09375 | Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
| KGL13657.1 | hisH | LS73_00855 | LS73_00850 | Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.786 |
| KGL13657.1 | polA | LS73_00855 | LS73_10155 | Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.465 |
| KGL13657.1 | rpe | LS73_00855 | LS73_00845 | Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family. | 0.436 |
| cysE | KGL13657.1 | LS73_00860 | LS73_00855 | Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
| cysE | hisH | LS73_00860 | LS73_00850 | Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.599 |
| fliY_1 | KGL13657.1 | LS73_09375 | LS73_00855 | Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method: Protein Homology. | Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
| hisH | KGL13657.1 | LS73_00850 | LS73_00855 | Hypothetical protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.786 |
| hisH | cysE | LS73_00850 | LS73_00860 | Hypothetical protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.599 |
| hisH | rpe | LS73_00850 | LS73_00845 | Hypothetical protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family. | 0.429 |
| polA | KGL13657.1 | LS73_10155 | LS73_00855 | Hypothetical protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
| rpe | KGL13657.1 | LS73_00845 | LS73_00855 | Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family. | Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
| rpe | hisH | LS73_00845 | LS73_00850 | Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family. | Hypothetical protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.429 |