Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KGL12833.1 | KGL13791.1 | LS73_06315 | LS73_01790 | Hemerythrin-like metal-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.647 |
| KGL12833.1 | ndk | LS73_06315 | LS73_05705 | Hemerythrin-like metal-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.787 |
| KGL12833.1 | ribBA | LS73_06315 | LS73_02200 | Hemerythrin-like metal-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.906 |
| KGL12833.1 | spoT | LS73_06315 | LS73_02125 | Hemerythrin-like metal-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penta-phosphate guanosine-3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.820 |
| KGL12833.1 | yurV | LS73_06315 | LS73_06485 | Hemerythrin-like metal-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.709 |
| KGL13791.1 | KGL12833.1 | LS73_01790 | LS73_06315 | Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hemerythrin-like metal-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.647 |
| KGL13791.1 | hemH | LS73_01790 | LS73_01630 | Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.491 |
| KGL13791.1 | ndk | LS73_01790 | LS73_05705 | Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.437 |
| KGL13791.1 | ribBA | LS73_01790 | LS73_02200 | Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.770 |
| KGL13791.1 | rmlA2 | LS73_01790 | LS73_01795 | Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.606 |
| KGL13791.1 | spoT | LS73_01790 | LS73_02125 | Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penta-phosphate guanosine-3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.451 |
| KGL13791.1 | yurV | LS73_01790 | LS73_06485 | Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.492 |
| hemH | KGL13791.1 | LS73_01630 | LS73_01790 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.491 |
| hemH | yurV | LS73_01630 | LS73_06485 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.463 |
| ndk | KGL12833.1 | LS73_05705 | LS73_06315 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Hemerythrin-like metal-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.787 |
| ndk | KGL13791.1 | LS73_05705 | LS73_01790 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.437 |
| ndk | ribBA | LS73_05705 | LS73_02200 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.911 |
| ndk | spoT | LS73_05705 | LS73_02125 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Penta-phosphate guanosine-3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.940 |
| ribBA | KGL12833.1 | LS73_02200 | LS73_06315 | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | Hemerythrin-like metal-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
| ribBA | KGL13791.1 | LS73_02200 | LS73_01790 | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.770 |
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