STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdMDerived by automated computational analysis using gene prediction method: Protein Homology. (694 aa)    
Predicted Functional Partners:
KGL14009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
KGL13252.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
hsdR1b
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.962
KGL12616.1
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.932
KGL13421.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.834
KGL13806.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.818
KGL13391.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.818
KGL13250.1
RlfA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.813
KGL13422.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.811
KGL13251.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.810
Your Current Organism:
Helicobacter muridarum
NCBI taxonomy Id: 216
Other names: ATCC 49282, CCUG 29262, CIP 104248, DSM 22221, H. muridarum, LMG 13646, LMG:13646, NCTC 12714, strain ST1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.