STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KGL12823.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (640 aa)    
Predicted Functional Partners:
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.866
KGL13261.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.804
bdlA_4
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.802
KGL13280.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.787
mcp4_8
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.787
KGL13315.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.739
KGL12930.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.739
KGL12969.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.739
ctpB
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
   
 
 0.732
degP
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.
  
 
 0.722
Your Current Organism:
Helicobacter muridarum
NCBI taxonomy Id: 216
Other names: ATCC 49282, CCUG 29262, CIP 104248, DSM 22221, H. muridarum, LMG 13646, LMG:13646, NCTC 12714, strain ST1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.