STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS16050.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1424 aa)    
Predicted Functional Partners:
AIS18411.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.758
AIS18466.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
AIS16411.1
Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.750
AIS16413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.750
AIS16412.1
Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.722
AIS16051.1
Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
AIS16711.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.698
AIS16348.1
Flagellar hook-length control protein FliK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.643
AIS18470.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.637
AIS17770.1
TPR repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.632
Your Current Organism:
Pseudomonas rhizosphaerae
NCBI taxonomy Id: 216142
Other names: CECT 5726, DSM 16299, LMG 21640, LMG:21640, P. rhizosphaerae, Pseudomonas rhizosphaerae Peix et al. 2003, strain IH5
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.