Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIS16212.1 | AIS17700.1 | LT40_01880 | LT40_09970 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. | 0.461 |
AIS16212.1 | AIS19586.1 | LT40_01880 | LT40_20210 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.603 |
AIS16212.1 | AIS19748.1 | LT40_01880 | LT40_21085 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. | 0.461 |
AIS16212.1 | rpiA | LT40_01880 | LT40_15540 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.528 |
AIS17700.1 | AIS16212.1 | LT40_09970 | LT40_01880 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
AIS19586.1 | AIS16212.1 | LT40_20210 | LT40_01880 | NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.603 |
AIS19748.1 | AIS16212.1 | LT40_21085 | LT40_01880 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
rpiA | AIS16212.1 | LT40_15540 | LT40_01880 | Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.528 |