STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS18685.1Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)    
Predicted Functional Partners:
AIS15892.1
Glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.927
AIS18813.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.914
AIS17710.1
Gluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.912
AIS19638.1
Bifunctional glyoxylate/hydroxypyruvate reductase B; Catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.909
AIS18814.1
Gluconate 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.908
AIS17898.1
Sugar dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.905
AIS18056.1
Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.643
AIS18058.1
Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.599
AIS17071.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.590
AIS17680.1
6-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.590
Your Current Organism:
Pseudomonas rhizosphaerae
NCBI taxonomy Id: 216142
Other names: CECT 5726, DSM 16299, LMG 21640, LMG:21640, P. rhizosphaerae, Pseudomonas rhizosphaerae Peix et al. 2003, strain IH5
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