BRM9_0807 protein (Methanobacterium formicicum)

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Score

BRM9_0807

RNA-binding protein. (53 aa)

Predicted Functional Partners:

rps3p

0.980

rpl29

0.979

rps17e

0.979

rpl40e

0.979

rpl22p

0.978

ef1b

0.977

rpl39e

0.975

rpl15e

0.974

rps27ae

0.972

rps27e

0.972

Your Current Organism:

Methanobacterium formicicum

NCBI taxonomy Id: 2162
Other names: ATCC 33274, JCM 10132, M. formicicum, Methanobacterium sp. BRM9, NBRC 100475, OCM 55, strain MF

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRM9_0807	ef1b	BRM9_0807	BRM9_0806	RNA-binding protein.	Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	0.977
BRM9_0807	rpl15e	BRM9_0807	BRM9_1743	RNA-binding protein.	Ribosomal protein L15e Rpl15e; Belongs to the eukaryotic ribosomal protein eL15 family.	0.974
BRM9_0807	rpl22p	BRM9_0807	BRM9_0402	RNA-binding protein.	Ribosomal protein L22P Rpl22p; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.978
BRM9_0807	rpl29	BRM9_0807	BRM9_0400	RNA-binding protein.	Ribosomal protein L29P Rpl29p; Belongs to the universal ribosomal protein uL29 family.	0.979
BRM9_0807	rpl39e	BRM9_0807	BRM9_0706	RNA-binding protein.	Ribosomal protein L39e Rpl39e; Belongs to the eukaryotic ribosomal protein eL39 family.	0.975
BRM9_0807	rpl40e	BRM9_0807	BRM9_1834	RNA-binding protein.	Ribosomal protein L40e Rpl40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.979
BRM9_0807	rps17e	BRM9_0807	BRM9_1464	RNA-binding protein.	Ribosomal protein S17e Rps17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.979
BRM9_0807	rps27ae	BRM9_0807	BRM9_0612	RNA-binding protein.	Ribosomal protein S27ae Rps27ae; Belongs to the eukaryotic ribosomal protein eS31 family.	0.972
BRM9_0807	rps27e	BRM9_0807	BRM9_2260	RNA-binding protein.	Ribosomal protein S27e Rps27e.	0.972
BRM9_0807	rps3p	BRM9_0807	BRM9_0401	RNA-binding protein.	Ribosomal protein S3P Rps3p; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.980
ef1b	BRM9_0807	BRM9_0806	BRM9_0807	Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	RNA-binding protein.	0.977
ef1b	rpl15e	BRM9_0806	BRM9_1743	Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	Ribosomal protein L15e Rpl15e; Belongs to the eukaryotic ribosomal protein eL15 family.	0.935
ef1b	rpl22p	BRM9_0806	BRM9_0402	Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	Ribosomal protein L22P Rpl22p; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.940
ef1b	rpl29	BRM9_0806	BRM9_0400	Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	Ribosomal protein L29P Rpl29p; Belongs to the universal ribosomal protein uL29 family.	0.967
ef1b	rpl39e	BRM9_0806	BRM9_0706	Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	Ribosomal protein L39e Rpl39e; Belongs to the eukaryotic ribosomal protein eL39 family.	0.881
ef1b	rpl40e	BRM9_0806	BRM9_1834	Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	Ribosomal protein L40e Rpl40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.890
ef1b	rps17e	BRM9_0806	BRM9_1464	Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	Ribosomal protein S17e Rps17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.899
ef1b	rps27ae	BRM9_0806	BRM9_0612	Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	Ribosomal protein S27ae Rps27ae; Belongs to the eukaryotic ribosomal protein eS31 family.	0.856
ef1b	rps27e	BRM9_0806	BRM9_2260	Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	Ribosomal protein S27e Rps27e.	0.962
ef1b	rps3p	BRM9_0806	BRM9_0401	Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	Ribosomal protein S3P Rps3p; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.972