STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP87107.1Hypothetical protein. (266 aa)    
Predicted Functional Partners:
EAP87106.1
Probable acyl-CoA dehydrogenase.
 
     0.787
EAP88052.1
Competence protein.
 
  
 0.727
EAP87112.1
Hypothetical protein.
 
     0.640
EAP88446.1
Hypothetical protein.
  
     0.640
EAP87792.1
Smf protein DNA processing chain A.
 
  
 0.637
EAP87108.1
Putative Na(+)-linked D-alanine glycine permease.
       0.626
EAP87639.1
Hypothetical protein.
  
     0.599
EAP87435.1
Putative amidophosphoribosyl-transferase.
 
  
 0.578
EAP87124.1
TPR-domain containing protein.
 
   
 0.563
rpsU
Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
    0.555
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.