STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP87140.1Putative regulatory protein. (187 aa)    
Predicted Functional Partners:
EAP87141.1
Putative copper transport-related membrane protein.
 
 
 0.837
EAP86799.1
Copper/Zinc superoxide dismutase.
  
 0.717
EAP86632.1
Heavy-metal transporting P-type ATPase.
  
 
 0.592
EAP86703.1
Heavy-metal transporting P-type ATPase.
  
 
 0.592
EAP86692.1
Cation-transporting ATPase, P-type, putative zinc-transporting ATPase.
  
 
 0.586
EAP87142.1
Hypothetical protein.
 
     0.568
EAP87271.1
Transcriptional regulator, MerR family protein.
  
 
 0.478
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.432
EAP87391.1
Two-component system sensor histidine kinase.
 
  
 0.404
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.