STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP87194.1Putative arginine decarboxylase. (486 aa)    
Predicted Functional Partners:
EAP87193.1
Arginase; Belongs to the arginase family.
 
 
 0.991
EAP87192.1
Hypothetical protein.
 
     0.925
EAP86098.1
Hypothetical protein.
  
   
 0.606
EAP87191.1
Putative carbon-nitrogen hydrolase.
     
 0.556
EAP86470.1
Hypothetical protein.
 
     0.500
EAP87455.1
Possible acyl protein synthase/acyl-CoA reductase-like protein.
  
     0.468
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
    0.441
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
 
  
 0.436
EAP87508.1
Hypothetical protein.
  
     0.426
EAP87190.1
Hypothetical protein.
       0.401
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.