Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAP87541.1 | EAP87542.1 | CA2559_02260 | CA2559_02265 | Hypothetical protein. | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | 0.915 |
EAP87541.1 | EAP87543.1 | CA2559_02260 | CA2559_02270 | Hypothetical protein. | DNA ligase. | 0.903 |
EAP87541.1 | EAP87544.1 | CA2559_02260 | CA2559_02275 | Hypothetical protein. | Hypothetical protein. | 0.897 |
EAP87542.1 | EAP87541.1 | CA2559_02265 | CA2559_02260 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | Hypothetical protein. | 0.915 |
EAP87542.1 | EAP87543.1 | CA2559_02265 | CA2559_02270 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | DNA ligase. | 0.951 |
EAP87542.1 | EAP87544.1 | CA2559_02265 | CA2559_02275 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | Hypothetical protein. | 0.952 |
EAP87542.1 | EAP87545.1 | CA2559_02265 | CA2559_02280 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | Sensory box sensor histidine kinase/response regulator. | 0.527 |
EAP87542.1 | EAP87546.1 | CA2559_02265 | CA2559_02285 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | Hypothetical protein. | 0.527 |
EAP87542.1 | EAP87547.1 | CA2559_02265 | CA2559_02290 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | Hypothetical protein. | 0.527 |
EAP87542.1 | EAP87548.1 | CA2559_02265 | CA2559_02295 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | Fructose-1,6-bisphosphatase. | 0.501 |
EAP87542.1 | EAP88012.1 | CA2559_02265 | CA2559_04615 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | Putative DNA polymerase III alpha subunit. | 0.412 |
EAP87542.1 | nnrE | CA2559_02265 | CA2559_11168 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | Putative YjeF-related sugar kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repa [...] | 0.403 |
EAP87542.1 | radA | CA2559_02265 | CA2559_01480 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | Putative DNA repair protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.548 |
EAP87543.1 | EAP87541.1 | CA2559_02270 | CA2559_02260 | DNA ligase. | Hypothetical protein. | 0.903 |
EAP87543.1 | EAP87542.1 | CA2559_02270 | CA2559_02265 | DNA ligase. | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | 0.951 |
EAP87543.1 | EAP87544.1 | CA2559_02270 | CA2559_02275 | DNA ligase. | Hypothetical protein. | 0.997 |
EAP87543.1 | EAP87545.1 | CA2559_02270 | CA2559_02280 | DNA ligase. | Sensory box sensor histidine kinase/response regulator. | 0.548 |
EAP87543.1 | EAP87546.1 | CA2559_02270 | CA2559_02285 | DNA ligase. | Hypothetical protein. | 0.571 |
EAP87543.1 | EAP87547.1 | CA2559_02270 | CA2559_02290 | DNA ligase. | Hypothetical protein. | 0.541 |
EAP87543.1 | EAP87548.1 | CA2559_02270 | CA2559_02295 | DNA ligase. | Fructose-1,6-bisphosphatase. | 0.514 |
page 1 of 3