STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP87786.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
EAP87788.1
Hypothetical protein.
 
     0.925
EAP86594.1
Hypothetical protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
     0.734
EAP87787.1
Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.732
EAP86636.1
Hypothetical protein.
  
     0.690
EAP86039.1
Hypothetical protein.
  
     0.658
EAP86130.1
Hypothetical protein.
  
     0.625
EAP87486.1
Hypothetical protein.
  
     0.617
EAP87670.1
Hypothetical protein.
  
     0.615
EAP88216.1
Hypothetical protein.
  
     0.606
EAP86129.1
Hypothetical protein.
  
     0.604
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.