STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP87924.1Hypothetical protein. (444 aa)    
Predicted Functional Partners:
EAP87925.1
Hypothetical protein.
 
     0.952
EAP87923.1
Hypothetical protein.
 
     0.925
EAP87922.1
Outer membrane protein.
 
     0.904
EAP87921.1
Hypothetical protein.
 
     0.782
EAP86468.1
CpmD protein involved in carbapenem biosynthesis.
  
  
 0.612
EAP87926.1
3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family.
       0.590
EAP87927.1
Hypothetical protein.
       0.590
apt
Adenine phosphoribosyl transferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.537
EAP88096.1
Hypothetical protein.
 
     0.473
EAP87978.1
AttM/AiiB family protein.
  
     0.445
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.