STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP88003.1leucyl/phenylalanyl-tRNA--protein transferase. (194 aa)    
Predicted Functional Partners:
EAP88004.1
Hypothetical protein.
 
     0.954
EAP88002.1
DNA-3-methyladenine glycosidase I.
       0.803
EAP88001.1
Hypothetical protein.
       0.556
EAP87827.1
Hypothetical protein.
  
     0.555
EAP86591.1
Hypothetical protein.
  
     0.543
EAP87088.1
Hypothetical protein.
  
     0.471
EAP86459.1
Site-specific recombinase, phage integrase family/ribosomal subunitinterface protein.
  
     0.468
EAP87089.2
Hypothetical protein.
  
     0.433
EAP86984.1
Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.416
EAP87243.1
Hypothetical protein.
  
     0.411
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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