STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP88006.1Hydrolase, carbon-nitrogen family protein. (321 aa)    
Predicted Functional Partners:
EAP88282.1
Amidase.
 
 
 0.923
EAP87592.1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.921
EAP87577.1
Probable piperideine-6-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.912
EAP86146.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.912
EAP88589.1
Glutamine synthetase.
    
  0.900
EAP87609.1
4-hydroxyphenylpyruvate dioxygenase.
   
 0.826
EAP86940.1
Probable delta-1-pyrroline-5-carboxylate dehydrogenase.
   
 0.825
EAP88559.1
Putative aspartate aminotransferase.
  
 
 0.823
EAP85937.1
Aspartate aminotransferase.
  
 
 0.823
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
  0.808
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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