STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP88140.1Phenylacetic acid degradation protein; Putative transferase. (204 aa)    
Predicted Functional Partners:
EAP88144.1
Aldehyde dehydrogenase.
 
   
 0.839
EAP88142.1
Putative enoyl-CoA hydratase/isomerase.
 
  
 0.780
EAP88139.1
Endo/excinuclease amino terminal domain protein.
       0.773
EAP88141.1
Endo/excinuclease amino terminal domain protein.
       0.682
EAP86440.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.637
EAP88148.1
Hypothetical protein.
 
  
 0.583
EAP88151.1
enoyl-CoA hydratase/isomerase PhaB.
 
  
 0.478
EAP88143.1
Hypothetical protein.
       0.423
EAP88149.1
3-hydroxybutyryl-CoA dehydrogenase.
 
   
 0.417
EAP88134.1
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit.
 
     0.415
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.