STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP88182.1Hypothetical protein. (390 aa)    
Predicted Functional Partners:
EAP87331.1
Hypothetical protein.
  
 
 0.999
EAP88183.1
Hypothetical protein.
 
   
 0.918
EAP86792.1
Hypothetical protein.
  
   
 0.799
EAP85989.1
Response regulator.
  
   
 0.775
EAP88184.1
Lipoprotein, putative.
 
     0.772
EAP86250.1
Hypothetical protein.
  
     0.771
EAP87426.1
Sensor histidine kinase.
 
   
 0.770
EAP86809.1
porT protein.
  
   
 0.761
EAP87951.1
Cationic outer membrane protein precursor.
  
    0.753
EAP87693.1
TPR domain protein.
  
   
 0.740
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.