STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP88198.1Hypothetical protein. (646 aa)    
Predicted Functional Partners:
EAP88588.1
Hypothetical protein.
  
     0.719
EAP88196.1
Ribonuclease HII.
 
     0.667
rnhB
Putative ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
     0.661
EAP87236.1
Hypothetical protein.
  
     0.626
EAP86422.1
Hypothetical protein.
  
     0.624
EAP86811.1
Hypothetical protein.
  
     0.603
EAP85944.1
Hypothetical protein.
  
     0.585
EAP88419.1
Hypothetical protein.
 
 
 
 0.584
secE
Elongation factor Tu; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.577
EAP86985.1
Hypothetical protein.
  
     0.569
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.