Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAP86575.1 | EAP88218.1 | CA2559_11083 | CA2559_05645 | Putative exported N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.432 |
EAP87583.1 | EAP88218.1 | CA2559_02470 | CA2559_05645 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Hypothetical protein. | 0.465 |
EAP88217.1 | EAP88218.1 | CA2559_05640 | CA2559_05645 | Putative ATPase, AAA family protein. | Hypothetical protein. | 0.629 |
EAP88218.1 | EAP86575.1 | CA2559_05645 | CA2559_11083 | Hypothetical protein. | Putative exported N-acetylmuramoyl-L-alanine amidase. | 0.432 |
EAP88218.1 | EAP87583.1 | CA2559_05645 | CA2559_02470 | Hypothetical protein. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.465 |
EAP88218.1 | EAP88217.1 | CA2559_05645 | CA2559_05640 | Hypothetical protein. | Putative ATPase, AAA family protein. | 0.629 |
EAP88218.1 | tatA | CA2559_05645 | CA2559_02885 | Hypothetical protein. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.422 |
EAP88218.1 | tatA-2 | CA2559_05645 | CA2559_07460 | Hypothetical protein. | Twin-arginine translocation protein TatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.422 |
tatA | EAP88218.1 | CA2559_02885 | CA2559_05645 | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Hypothetical protein. | 0.422 |
tatA | tatA-2 | CA2559_02885 | CA2559_07460 | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Twin-arginine translocation protein TatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.938 |
tatA-2 | EAP88218.1 | CA2559_07460 | CA2559_05645 | Twin-arginine translocation protein TatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Hypothetical protein. | 0.422 |
tatA-2 | tatA | CA2559_07460 | CA2559_02885 | Twin-arginine translocation protein TatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.938 |