Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAP87153.1 | EAP87833.1 | CA2559_00320 | CA2559_03720 | Hypothetical protein. | DnaJ domain containing protein. | 0.800 |
EAP87153.1 | EAP88527.1 | CA2559_00320 | CA2559_07190 | Hypothetical protein. | Probable peptidyl-prolyl cis-trans isomerase. | 0.974 |
EAP87153.1 | clpB | CA2559_00320 | CA2559_09888 | Hypothetical protein. | Putative heat shock ClpB protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.634 |
EAP87153.1 | dnaJ | CA2559_00320 | CA2559_08256 | Hypothetical protein. | Chaperone protein dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.793 |
EAP87153.1 | dnaK | CA2559_00320 | CA2559_07165 | Hypothetical protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.930 |
EAP87153.1 | groL | CA2559_00320 | CA2559_00670 | Hypothetical protein. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.794 |
EAP87153.1 | groS | CA2559_00320 | CA2559_00675 | Hypothetical protein. | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.696 |
EAP87153.1 | grpE | CA2559_00320 | CA2559_08251 | Hypothetical protein. | GrpE protein (Hsp-70 cofactor); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds [...] | 0.661 |
EAP87833.1 | EAP87153.1 | CA2559_03720 | CA2559_00320 | DnaJ domain containing protein. | Hypothetical protein. | 0.800 |
EAP87833.1 | EAP88527.1 | CA2559_03720 | CA2559_07190 | DnaJ domain containing protein. | Probable peptidyl-prolyl cis-trans isomerase. | 0.559 |
EAP87833.1 | EAP88595.1 | CA2559_03720 | CA2559_07530 | DnaJ domain containing protein. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.800 |
EAP87833.1 | clpB | CA2559_03720 | CA2559_09888 | DnaJ domain containing protein. | Putative heat shock ClpB protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.698 |
EAP87833.1 | dnaK | CA2559_03720 | CA2559_07165 | DnaJ domain containing protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.913 |
EAP87833.1 | groL | CA2559_03720 | CA2559_00670 | DnaJ domain containing protein. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.672 |
EAP87833.1 | groS | CA2559_03720 | CA2559_00675 | DnaJ domain containing protein. | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.585 |
EAP87833.1 | grpE | CA2559_03720 | CA2559_08251 | DnaJ domain containing protein. | GrpE protein (Hsp-70 cofactor); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds [...] | 0.794 |
EAP87833.1 | rplP | CA2559_03720 | CA2559_05750 | DnaJ domain containing protein. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.470 |
EAP88527.1 | EAP87153.1 | CA2559_07190 | CA2559_00320 | Probable peptidyl-prolyl cis-trans isomerase. | Hypothetical protein. | 0.974 |
EAP88527.1 | EAP87833.1 | CA2559_07190 | CA2559_03720 | Probable peptidyl-prolyl cis-trans isomerase. | DnaJ domain containing protein. | 0.559 |
EAP88527.1 | EAP88595.1 | CA2559_07190 | CA2559_07530 | Probable peptidyl-prolyl cis-trans isomerase. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.970 |
page 1 of 5