STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP88540.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
EAP88536.1
ABC transporter, permease protein.
       0.773
EAP88537.1
Xanthan biosynthesis pyruvyltransferase GumL.
       0.773
EAP88538.1
ABC transporter, ATP-binding protein.
       0.773
EAP88539.1
Hypothetical protein.
       0.773
EAP88541.1
Hypothetical protein.
       0.773
EAP88542.1
Xanthan biosynthesis pyruvyltransferase GumL.
       0.773
EAP88543.1
Hypothetical protein.
       0.746
EAP88544.1
Glycosyl transferase.
       0.746
EAP88545.1
Glycosyl transferase.
       0.685
EAP88546.1
Hypothetical protein.
       0.685
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.