STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP88556.1Hypothetical protein. (61 aa)    
Predicted Functional Partners:
EAP88536.1
ABC transporter, permease protein.
  
  
 0.509
EAP88555.1
Unknown membrane protein.
       0.498
EAP88552.1
Glycosyltransferase.
  
    0.493
EAP88551.1
Hypothetical protein.
       0.492
EAP88553.1
Hypothetical protein.
       0.485
EAP88550.1
N-acetylneuraminic acid phosphate synthase.
       0.483
EAP88554.1
Hypothetical protein.
      
0.483
EAP88535.1
Putative tyrosine-protein kinase in cps region.
  
  
 0.466
EAP88538.1
ABC transporter, ATP-binding protein.
  
  
 0.422
EAP88534.1
Polysaccharide export protein, BexD/CtrA/VexA family protein.
  
  
 0.402
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.