Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAP85909.1 | EAP85910.1 | CA2559_07751 | CA2559_07756 | Hypothetical protein. | Hypothetical protein. | 0.774 |
EAP85909.1 | EAP85912.1 | CA2559_07751 | CA2559_07766 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EAP85909.1 | aroA | CA2559_07751 | CA2559_07746 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.774 |
EAP85909.1 | kynU | CA2559_07751 | CA2559_07761 | Hypothetical protein. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.773 |
EAP85910.1 | EAP85909.1 | CA2559_07756 | CA2559_07751 | Hypothetical protein. | Hypothetical protein. | 0.774 |
EAP85910.1 | EAP85912.1 | CA2559_07756 | CA2559_07766 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EAP85910.1 | aroA | CA2559_07756 | CA2559_07746 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.977 |
EAP85910.1 | kynU | CA2559_07756 | CA2559_07761 | Hypothetical protein. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.773 |
EAP85912.1 | EAP85909.1 | CA2559_07766 | CA2559_07751 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EAP85912.1 | EAP85910.1 | CA2559_07766 | CA2559_07756 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EAP85912.1 | aroA | CA2559_07766 | CA2559_07746 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.773 |
EAP85912.1 | kynU | CA2559_07766 | CA2559_07761 | Hypothetical protein. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.783 |
EAP86469.1 | EAP88435.1 | CA2559_10553 | CA2559_06730 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | Shikimate 5-dehydrogenase. | 0.982 |
EAP86469.1 | EAP88566.1 | CA2559_10553 | CA2559_07385 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | Putative chorismate mutase. | 0.974 |
EAP86469.1 | aroA | CA2559_10553 | CA2559_07746 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.989 |
EAP86469.1 | aroC | CA2559_10553 | CA2559_11018 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.981 |
EAP86469.1 | aroK | CA2559_10553 | CA2559_00900 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.963 |
EAP88435.1 | EAP86469.1 | CA2559_06730 | CA2559_10553 | Shikimate 5-dehydrogenase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.982 |
EAP88435.1 | EAP88566.1 | CA2559_06730 | CA2559_07385 | Shikimate 5-dehydrogenase. | Putative chorismate mutase. | 0.923 |
EAP88435.1 | aroA | CA2559_06730 | CA2559_07746 | Shikimate 5-dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.990 |
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