STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP86015.1Two component, sigma54 specific, transcriptional regulator, Fis family protein. (388 aa)    
Predicted Functional Partners:
EAP87825.1
Nitrogen regulation protein ntrY.
 0.972
EAP86888.1
Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity.
  
  
 0.824
EAP87637.1
RNA polymerase.
 
  
 0.792
EAP86011.1
ABC transporter, ATP-binding protein.
       0.783
EAP86012.1
ABC transporter, permease protein, putative.
       0.783
EAP86013.1
Hypothetical protein.
       0.780
EAP86014.1
Hypothetical protein.
       0.779
EAP88183.1
Hypothetical protein.
  
  
 0.565
EAP87450.1
PhoR.
 
 0.514
EAP85929.1
Hybrid sensory kinase.
 
 0.507
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.