STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP86183.1Putative enzyme with aminotransferase class-III domain protein. (231 aa)    
Predicted Functional Partners:
EAP88439.1
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
   0.899
EAP86075.1
Acetylornithine aminotransferase, putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
   0.721
EAP86184.1
Hypothetical protein.
       0.629
EAP86185.1
Hypothetical protein.
       0.629
EAP86186.1
Putative RNA polymerase sigma factor protein; Belongs to the sigma-70 factor family. ECF subfamily.
       0.613
EAP87386.1
Peptidase.
  
     0.542
EAP88168.1
Adenosylmethionine-8-Amino-7-Oxononanoate Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
      0.437
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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