node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAP86302.1 | EAP86303.1 | CA2559_09718 | CA2559_09723 | DNA topoisomerase IV subunit B. | DNA topoisomerase IV subunit A. | 0.986 |
EAP86302.1 | EAP86305.1 | CA2559_09718 | CA2559_09733 | DNA topoisomerase IV subunit B. | Putative DNA topoisomerase I. | 0.617 |
EAP86302.1 | EAP86871.1 | CA2559_09718 | CA2559_12563 | DNA topoisomerase IV subunit B. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.568 |
EAP86302.1 | EAP87762.1 | CA2559_09718 | CA2559_03365 | DNA topoisomerase IV subunit B. | glutamyl-tRNA synthetase. | 0.553 |
EAP86302.1 | argS | CA2559_09718 | CA2559_05910 | DNA topoisomerase IV subunit B. | arginyl-tRNA synthetase. | 0.609 |
EAP86302.1 | gyrA | CA2559_09718 | CA2559_11138 | DNA topoisomerase IV subunit B. | DNA gyrase A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.974 |
EAP86302.1 | polA | CA2559_09718 | CA2559_02590 | DNA topoisomerase IV subunit B. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.554 |
EAP86302.1 | recF | CA2559_09718 | CA2559_09773 | DNA topoisomerase IV subunit B. | Putative DNA replication and repair protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.659 |
EAP86302.1 | secD | CA2559_09718 | CA2559_08751 | DNA topoisomerase IV subunit B. | Putative protein-export transmembrane SecDF protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.565 |
EAP86302.1 | topA | CA2559_09718 | CA2559_00715 | DNA topoisomerase IV subunit B. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.585 |
EAP86303.1 | EAP86302.1 | CA2559_09723 | CA2559_09718 | DNA topoisomerase IV subunit A. | DNA topoisomerase IV subunit B. | 0.986 |
EAP86303.1 | argS | CA2559_09723 | CA2559_05910 | DNA topoisomerase IV subunit A. | arginyl-tRNA synthetase. | 0.597 |
EAP86303.1 | polA | CA2559_09723 | CA2559_02590 | DNA topoisomerase IV subunit A. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.404 |
EAP86303.1 | secD | CA2559_09723 | CA2559_08751 | DNA topoisomerase IV subunit A. | Putative protein-export transmembrane SecDF protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.796 |
EAP86305.1 | EAP86302.1 | CA2559_09733 | CA2559_09718 | Putative DNA topoisomerase I. | DNA topoisomerase IV subunit B. | 0.617 |
EAP86305.1 | polA | CA2559_09733 | CA2559_02590 | Putative DNA topoisomerase I. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.426 |
EAP86305.1 | topA | CA2559_09733 | CA2559_00715 | Putative DNA topoisomerase I. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.407 |
EAP86871.1 | EAP86302.1 | CA2559_12563 | CA2559_09718 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA topoisomerase IV subunit B. | 0.568 |
EAP86871.1 | polA | CA2559_12563 | CA2559_02590 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
EAP86871.1 | recF | CA2559_12563 | CA2559_09773 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | Putative DNA replication and repair protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.862 |