STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP86377.1Putative AraC family transcriptional regulator. (304 aa)    
Predicted Functional Partners:
EAP86378.1
Hypothetical protein.
       0.757
EAP86379.1
Hypothetical protein.
       0.751
EAP86888.1
Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity.
  
  
 0.612
EAP87391.1
Two-component system sensor histidine kinase.
   
 
 0.533
EAP87545.1
Sensory box sensor histidine kinase/response regulator.
   
 
 0.533
EAP85929.1
Hybrid sensory kinase.
   
 
 0.533
EAP86376.1
Hypothetical protein.
       0.519
EAP86667.1
Sensory transduction histidine kinase.
   
 
 0.497
EAP86380.1
Lkanal monooxygenase-like protein YvbT.
       0.462
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.