STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP86478.1Hypothetical protein. (217 aa)    
Predicted Functional Partners:
EAP86479.1
Hypothetical protein.
 
     0.865
EAP86480.1
Putative methyltransferase.
       0.821
EAP87932.1
TPR domain protein.
  
     0.775
EAP87328.1
TonB.
  
     0.773
EAP87750.1
Hypothetical protein.
  
     0.771
EAP87640.1
Putative membrane protein.
  
     0.770
EAP87641.1
Hypothetical protein.
  
     0.770
EAP87327.1
TonB.
  
     0.756
EAP87281.1
Hypothetical protein.
  
     0.744
EAP86477.1
ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
 
     0.737
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.