STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP86641.1Putative cysteine synthase. (325 aa)    
Predicted Functional Partners:
EAP86642.1
Hypothetical protein.
     0.932
EAP86643.1
Probable diaminopimelate decarboxylase.
 
  
 0.914
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.756
EAP86957.1
Putative acetyltransferase.
  
 
 0.747
EAP86644.1
Hypothetical protein.
       0.714
EAP87594.1
Cystathionine gamma-synthase.
 
 0.685
EAP86645.1
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
     
 0.604
EAP88473.1
Hypothetical protein.
  
 
 0.592
EAP86168.1
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme.
 
 
 0.592
EAP86869.1
Cys/Met metabolism lyase (PLP-dependent).
 
 
 0.592
Your Current Organism:
Croceibacter atlanticus
NCBI taxonomy Id: 216432
Other names: C. atlanticus HTCC2559, Croceibacter atlanticus HTCC2559, Croceibacter atlanticus str. HTCC2559, Croceibacter atlanticus strain HTCC2559
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