STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJW13976.1Histidinol phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily. (290 aa)    
Predicted Functional Partners:
KJW13977.1
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.955
KJW13973.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.854
KJW13974.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.849
KJW13972.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.842
KJW13975.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.829
KJW13971.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.437
KJW13639.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.432
KJW13419.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.416
KJW12253.1
Fructose 1,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.415
ybeY
rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
    0.406
Your Current Organism:
Lactobacillus spicheri
NCBI taxonomy Id: 216463
Other names: DSM 15429, JCM 15956, L. spicheri, LMG 21871, LMG:21871, LTH 5753, Lactobacillus spicheri Meroth et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.