Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJW11625.1 | KJW13337.1 | VC81_12530 | VC81_02400 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ammonia permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
KJW13336.1 | KJW13337.1 | VC81_02395 | VC81_02400 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ammonia permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
KJW13337.1 | KJW11625.1 | VC81_02400 | VC81_12530 | Ammonia permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
KJW13337.1 | KJW13336.1 | VC81_02400 | VC81_02395 | Ammonia permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
KJW13337.1 | KJW13505.1 | VC81_02400 | VC81_03315 | Ammonia permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.528 |
KJW13337.1 | cinA | VC81_02400 | VC81_12035 | Ammonia permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | 0.456 |
KJW13337.1 | guaA | VC81_02400 | VC81_11160 | Ammonia permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.459 |
KJW13505.1 | KJW13337.1 | VC81_03315 | VC81_02400 | Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ammonia permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.528 |
KJW13505.1 | guaA | VC81_03315 | VC81_11160 | Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.530 |
cinA | KJW13337.1 | VC81_12035 | VC81_02400 | Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | Ammonia permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.456 |
guaA | KJW13337.1 | VC81_11160 | VC81_02400 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Ammonia permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
guaA | KJW13505.1 | VC81_11160 | VC81_03315 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.530 |