STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
KJW12154.1CDP-glycerol glycerophosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)    
Predicted Functional Partners:
KJW12156.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.981
KJW12155.1
Teichoic acid translocation permease TagG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.961
KJW11712.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.895
KJW11710.1
Glycerol-3-phosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.851
tagH
Teichoic acid ABC transporter ATP-binding protein; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
 
 
 0.844
nfo
Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
  
    0.809
KJW13019.1
acetylglucosaminyldiphospho-UDP acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
  
 0.618
KJW12200.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
KJW11824.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.502
KJW13093.1
UDP-phosphate N-acetyl-glucosaminyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.498
Your Current Organism:
Lactobacillus spicheri
NCBI taxonomy Id: 216463
Other names: DSM 15429, JCM 15956, L. spicheri, LMG 21871, LMG:21871, LTH 5753, Lactobacillus spicheri Meroth et al. 2004
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