Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KJW12285.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)    
Predicted Functional Partners:
KJW12286.1
ADP-ribose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
KJW12287.1
Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
KJW12284.1
5'-methylthioadenosine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
       0.758
KJW12283.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.682
KJW12282.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.679
KJW13947.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.652
KJW13332.1
Immunity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.627
KJW11692.1
Lyzozyme M1 (1,4-beta-N-acetylmuramidase); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
KJW11994.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
KJW12036.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.534
Your Current Organism:
Lactobacillus spicheri
NCBI taxonomy Id: 216463
Other names: DSM 15429, JCM 15956, L. spicheri, LMG 21871, LMG:21871, LTH 5753, Lactobacillus spicheri Meroth et al. 2004
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