node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJW11663.1 | KJW11738.1 | VC81_12785 | VC81_12775 | Calcium ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.778 |
KJW11663.1 | ligA | VC81_12785 | VC81_12780 | Calcium ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.905 |
KJW11738.1 | KJW11663.1 | VC81_12775 | VC81_12785 | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Calcium ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.778 |
KJW11738.1 | KJW12228.1 | VC81_12775 | VC81_10065 | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.602 |
KJW11738.1 | addA | VC81_12775 | VC81_06650 | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent helicase; ATP-dependent DNA helicase. | 0.644 |
KJW11738.1 | dnaE | VC81_12775 | VC81_09520 | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III DnaE; Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.481 |
KJW11738.1 | ligA | VC81_12775 | VC81_12780 | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.864 |
KJW11738.1 | polA | VC81_12775 | VC81_03540 | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.957 |
KJW11738.1 | topA | VC81_12775 | VC81_09365 | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.919 |
KJW12228.1 | KJW11738.1 | VC81_10065 | VC81_12775 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.602 |
KJW12228.1 | addA | VC81_10065 | VC81_06650 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent helicase; ATP-dependent DNA helicase. | 0.774 |
KJW12228.1 | dnaE | VC81_10065 | VC81_09520 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III DnaE; Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.770 |
KJW12228.1 | ligA | VC81_10065 | VC81_12780 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.805 |
KJW12228.1 | polA | VC81_10065 | VC81_03540 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.934 |
KJW12228.1 | ruvB | VC81_10065 | VC81_12070 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.830 |
KJW12228.1 | topA | VC81_10065 | VC81_09365 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.851 |
addA | KJW11738.1 | VC81_06650 | VC81_12775 | ATP-dependent helicase; ATP-dependent DNA helicase. | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.644 |
addA | KJW12228.1 | VC81_06650 | VC81_10065 | ATP-dependent helicase; ATP-dependent DNA helicase. | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.774 |
addA | ligA | VC81_06650 | VC81_12780 | ATP-dependent helicase; ATP-dependent DNA helicase. | NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.674 |
addA | polA | VC81_06650 | VC81_03540 | ATP-dependent helicase; ATP-dependent DNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.810 |