STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cwsAConserved hypothetical protein; Required for regulated cell division, cell wall synthesis and the maintenance of cell shape; Belongs to the CwsA family. (142 aa)    
Predicted Functional Partners:
wag31
Conserved secreted antigen Wag31; Function unknown but corresponds to antigen 84 of mycobacterium tuberculosis (Wag31) (see hermans et al., 1995). predicted to contain significant amount of coiled coil structure.
    
 
 0.838
ppiA
Peptidyl-prolyl cis-trans isomerase A, PpiA; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.735
fadE33
acyl-CoA dehydrogenase FadE33; Function unknown, but involved in lipid degradation.
      
 0.691
crgA
Conserved hypothetical membrane protein; Involved in cell division; Belongs to the CrgA family.
    
 
 0.690
fadE22
acyl-CoA dehydrogenase FadE22; Function unknown, but involved in lipid metabolism.
      
 0.607
fadE3
acyl-CoA dehydrogenase FadE3; Function unknown, but involved in lipid degradation.
      
 0.600
lpqD
Conserved lipoprotein, LpqD.
      
 0.592
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.585
MMAR_0009
Transcriptional regulator; Transcription.
     
 0.529
cyp123A3
Cytochrome P450s are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.
      
 0.528
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.