Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MMAR_0070 | MMAR_0071 | MMAR_0070 | MMAR_0071 | Conserved hypothetical transmembrane protein. | Transcriptional regulatory protein. | 0.898 |
| MMAR_0070 | ponA1 | MMAR_0070 | MMAR_0069 | Conserved hypothetical transmembrane protein. | Bifunctional penicillin-binding protein 1A/1B PonA1; Involved in peptidoglycan synthesis (at the final stages), cell wall formation. synthesis of cross-linked peptidoglycan from the lipid intermediates. the enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits). | 0.889 |
| MMAR_0070 | rpsF | MMAR_0070 | MMAR_0072 | Conserved hypothetical transmembrane protein. | 30S ribosomal protein S6 RpsF; Binds together with S18 to 16S ribosomal RNA. | 0.750 |
| MMAR_0071 | MMAR_0070 | MMAR_0071 | MMAR_0070 | Transcriptional regulatory protein. | Conserved hypothetical transmembrane protein. | 0.898 |
| MMAR_0071 | ponA1 | MMAR_0071 | MMAR_0069 | Transcriptional regulatory protein. | Bifunctional penicillin-binding protein 1A/1B PonA1; Involved in peptidoglycan synthesis (at the final stages), cell wall formation. synthesis of cross-linked peptidoglycan from the lipid intermediates. the enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits). | 0.874 |
| MMAR_0071 | rpsF | MMAR_0071 | MMAR_0072 | Transcriptional regulatory protein. | 30S ribosomal protein S6 RpsF; Binds together with S18 to 16S ribosomal RNA. | 0.750 |
| MMAR_1780 | MMAR_1840 | MMAR_1780 | MMAR_1840 | Conserved protein; Function unknown, possibly involved in cell division and chromosome partitioning. | Penicillin-binding lipoprotein; Function unknown, possibly involved in cell wall biosynthesis. | 0.545 |
| MMAR_1780 | ftsW | MMAR_1780 | MMAR_3194 | Conserved protein; Function unknown, possibly involved in cell division and chromosome partitioning. | FtsW-like protein FtsW; Function unknown function in cell division; Belongs to the SEDS family. | 0.411 |
| MMAR_1780 | ponA1 | MMAR_1780 | MMAR_0069 | Conserved protein; Function unknown, possibly involved in cell division and chromosome partitioning. | Bifunctional penicillin-binding protein 1A/1B PonA1; Involved in peptidoglycan synthesis (at the final stages), cell wall formation. synthesis of cross-linked peptidoglycan from the lipid intermediates. the enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits). | 0.731 |
| MMAR_1840 | MMAR_1780 | MMAR_1840 | MMAR_1780 | Penicillin-binding lipoprotein; Function unknown, possibly involved in cell wall biosynthesis. | Conserved protein; Function unknown, possibly involved in cell division and chromosome partitioning. | 0.545 |
| MMAR_1840 | dacB1 | MMAR_1840 | MMAR_5127 | Penicillin-binding lipoprotein; Function unknown, possibly involved in cell wall biosynthesis. | D-alanyl-D-alanine carboxypeptidase DacB1; Involved in peptidoglycan synthesis (at final stages). hydrolyzes the bound D-alanyl-D-alanine [catalytic activity: D-alanyl-D-alanine + H(2)O = 2 D- alanine]. | 0.688 |
| MMAR_1840 | ftsW | MMAR_1840 | MMAR_3194 | Penicillin-binding lipoprotein; Function unknown, possibly involved in cell wall biosynthesis. | FtsW-like protein FtsW; Function unknown function in cell division; Belongs to the SEDS family. | 0.819 |
| MMAR_1840 | ponA1 | MMAR_1840 | MMAR_0069 | Penicillin-binding lipoprotein; Function unknown, possibly involved in cell wall biosynthesis. | Bifunctional penicillin-binding protein 1A/1B PonA1; Involved in peptidoglycan synthesis (at the final stages), cell wall formation. synthesis of cross-linked peptidoglycan from the lipid intermediates. the enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits). | 0.803 |
| dacB1 | MMAR_1840 | MMAR_5127 | MMAR_1840 | D-alanyl-D-alanine carboxypeptidase DacB1; Involved in peptidoglycan synthesis (at final stages). hydrolyzes the bound D-alanyl-D-alanine [catalytic activity: D-alanyl-D-alanine + H(2)O = 2 D- alanine]. | Penicillin-binding lipoprotein; Function unknown, possibly involved in cell wall biosynthesis. | 0.688 |
| dacB1 | pbpA | MMAR_5127 | MMAR_0018 | D-alanyl-D-alanine carboxypeptidase DacB1; Involved in peptidoglycan synthesis (at final stages). hydrolyzes the bound D-alanyl-D-alanine [catalytic activity: D-alanyl-D-alanine + H(2)O = 2 D- alanine]. | Penicillin-binding protein PbpA; Involved in peptidoglycan synthesis (at the final stages). cell wall formation; PbpA is supposed to be responsible for the determination of the rod shape of the cell. its synthesizes cross-linked peptidoglycan from lipid intermediates. | 0.844 |
| dacB1 | pbpB | MMAR_5127 | MMAR_3200 | D-alanyl-D-alanine carboxypeptidase DacB1; Involved in peptidoglycan synthesis (at final stages). hydrolyzes the bound D-alanyl-D-alanine [catalytic activity: D-alanyl-D-alanine + H(2)O = 2 D- alanine]. | Penicillin-binding membrane protein PbpB; Involved in peptidoglycan biosynthesis. | 0.530 |
| dacB1 | ponA1 | MMAR_5127 | MMAR_0069 | D-alanyl-D-alanine carboxypeptidase DacB1; Involved in peptidoglycan synthesis (at final stages). hydrolyzes the bound D-alanyl-D-alanine [catalytic activity: D-alanyl-D-alanine + H(2)O = 2 D- alanine]. | Bifunctional penicillin-binding protein 1A/1B PonA1; Involved in peptidoglycan synthesis (at the final stages), cell wall formation. synthesis of cross-linked peptidoglycan from the lipid intermediates. the enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits). | 0.847 |
| ftsW | MMAR_1780 | MMAR_3194 | MMAR_1780 | FtsW-like protein FtsW; Function unknown function in cell division; Belongs to the SEDS family. | Conserved protein; Function unknown, possibly involved in cell division and chromosome partitioning. | 0.411 |
| ftsW | MMAR_1840 | MMAR_3194 | MMAR_1840 | FtsW-like protein FtsW; Function unknown function in cell division; Belongs to the SEDS family. | Penicillin-binding lipoprotein; Function unknown, possibly involved in cell wall biosynthesis. | 0.819 |
| ftsW | pbpA | MMAR_3194 | MMAR_0018 | FtsW-like protein FtsW; Function unknown function in cell division; Belongs to the SEDS family. | Penicillin-binding protein PbpA; Involved in peptidoglycan synthesis (at the final stages). cell wall formation; PbpA is supposed to be responsible for the determination of the rod shape of the cell. its synthesizes cross-linked peptidoglycan from lipid intermediates. | 0.951 |
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