STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_0807Conserved hypothetical protein. (174 aa)    
Predicted Functional Partners:
lprQ
Conserved lipoprotein LprQ.
 
     0.766
murB
UDP-N-acetylenolpyruvoylglucosamine reductase MurB; Cell wall formation.
       0.758
MMAR_0902
Conserved hypothetical membrane protein.
 
     0.755
MMAR_3077
Conserved membrane protein.
  
     0.740
MMAR_1345
Conserved alanine and valine rich protein.
  
    0.736
MMAR_4354
Conserved hypothetical transmembrane protein.
  
     0.735
MMAR_4356
Conserved protein.
  
     0.735
MMAR_4518
Conserved hypothetical transmembrane protein.
  
     0.730
MMAR_4669
Conserved hypothetical protein.
  
     0.723
MMAR_1133
Conserved hypothetical protein.
  
     0.712
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.