STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_1024Membrane glycosyl transferase. (470 aa)    
Predicted Functional Partners:
MMAR_1023
Catalyses the hydrolysis of creatinine to creatine.
 
  
 0.994
MMAR_1020
Conserved hypothetical protein.
 
   
 0.967
pqqE
Required for coenzyme pyrrolo-quinoline-quinone (PQQ) biosynthesis.
 
   
 0.967
MMAR_1025
Dehydrogenase.
  
  
 0.930
lldD1
L-lactate dehydrogenase (cytochrome) LldD1; Involved in respiration; catalyzes conversion of lactate into pyruvate [catalytic activity: (S)-lactate + 2 ferricytochrome C = pyruvate + 2 ferrocytochrome C].
 
   
 0.922
MMAR_1019
Involved in transcriptional mechanism.
 
   
 0.836
MMAR_5186
Sensor-component of a two-component regulator.
  
  
 0.804
MMAR_4503
Conserved hypothetical membrane protein; Function unknown, possibly involved in lipopolysaccharide synthesis.
  
  
 0.775
MMAR_0738
Two-component sensor and regulator.
  
 
 0.718
MMAR_1965
Short chain dehydrogenase; Function unknown, possibly involved in cellular metabolism.
 
 
 
 0.715
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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